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ISO/IEC 23092-3:2025

Information technology — Genomic information representation — Part 3: Metadata and application programming interfaces (APIs)

General information

Valid from 23.05.2025
Directives or regulations
None

Standard history

Status
Date
Type
Name
23.05.2025
Main
25.10.2022
Main
This document specifies information metadata, metrics metadata, clinical data linkage metadata, auxiliary fields, SAM interoperability, protection metadata and programming interfaces of genomic information. It defines:
—     metadata storage and interpretation for the different encapsulation levels as specified in ISO/IEC 23092-1 (in  REF Section_sec_6 \r \h Clause 6
08D0C9EA79F9BACE118C8200AA004BA90B02000000080000000E000000530065006300740069006F006E005F007300650063005F0036000000
);
—     metrics metadata containing sequencing data metrics at the dataset and access unit levels as specified in ISO/IEC 23092-1 (in  REF Section_sec_7 \r \h Clause 7
08D0C9EA79F9BACE118C8200AA004BA90B02000000080000000E000000530065006300740069006F006E005F007300650063005F0037000000
);
—     clinical data linkage metadata stored at the dataset group, dataset and annotation table levels as specified in ISO/IEC 23092-1 (in  REF Section_sec_8 \r \h Clause 8
08D0C9EA79F9BACE118C8200AA004BA90B02000000080000000E000000530065006300740069006F006E005F007300650063005F0038000000
);
—     protection elements providing confidentiality, integrity and privacy rules at the different encapsulation levels as specified in ISO/IEC 23092-1 (in  REF Section_sec_9 \r \h Clause 9
08D0C9EA79F9BACE118C8200AA004BA90B02000000080000000E000000530065006300740069006F006E005F007300650063005F0039000000
);
—     how to associate auxiliary fields to encoded reads (in  REF Section_sec_10 \r \h Clause 10
08D0C9EA79F9BACE118C8200AA004BA90B02000000080000000F000000530065006300740069006F006E005F007300650063005F00310030000000
);
—     interfaces to access genomic information coded in compliance with ISO/IEC 23092-1 and ISO/IEC 23092-2 (in  REF Section_sec_12 \r \h Clause 12
08D0C9EA79F9BACE118C8200AA004BA90B02000000080000000F000000530065006300740069006F006E005F007300650063005F00310032000000
);
— mechanisms for backward compatibility with existing SAM content, and exportation to this format (in Annex E).

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